12 changed files with 3771 additions and 6542 deletions
--- a/README.md
+++ b/README.md
@ -5,26 +5,23 @@ deployment
 ### Install the dependencies
-1. curl
+1. flex (for hmmlib)
 2. curl (for cinera)
-### Download, and copy the parser into place
+### Download, and prepare the parser
-1. `git clone https://git.handmade.network/Annotation-Pushers/Annotation-System.git`
+1. `git clone git@gitssh.handmade.network:Annotation-Pushers/Annotation-System.git`
-2. `cd Annotation-System/cinera`
+2. `cd Annotation-System/hmmlib`
-3. `cp ../hmmlib2/hmmlib.h .`
+3. `make`
 4. `cp hmml.a hmmlib.h ../cinera/`
 5. `cd ../cinera/`
-Note: For each parser update, remember to copy it into place.
+Note: For each parser update, remember to make and copy it into place.
 ### Build
 1. `$SHELL cinera.c`
 ### Configure
    cinera -h
 This documents the configuration file format and default settings.
 ### Configure the server
 If you enforce a strict Content Security Policy and X-Frame-Options in your
@ -41,24 +38,56 @@ and [Hardening your HTTP response headers](https://scotthelme.co.uk/hardening-yo
 ### Run
-    cinera -c /path/to/config.conf
+#### Single Edition operation
    cinera test.hmml
 This simply generates an HTML file (and updates `cinera_topics.css` if needed)
 from `test.hmml` and outputs to `out.html` (configurable with -o).
 #### Project Edition operation
    cinera -p ProjectID
 Setting the ProjectID with the `-p` flag triggers Project Edition. In this
 edition _Cinera_ monitors the Project Input Directory for new, edited and
 deleted .hmml files, and generates one table of contents / search page and a
 player page each for valid sets of annotations (or removes them, if needed).
 By default all directories - input and output - are set to the current working
 directory. Typical operation will involve setting these flags:
    -d Project Input Directory, the directory where the .hmml files reside
    -r Asset Root Directory, path shallower than or equal to the CSS, Images and
       JS directories
    -R Asset Root URL, corresponding to the Root Directory
    -c CSS Directory, relative to Root
    -i Images Directory, relative to Root
    -j JS Directory, relative to Root
    -b Output Base Directory, location of the table of contents / search page
    -B Output Base URL, corresponding to the Output Base Directory
    -t Template Directory
    -x Search Template Location, relative to Template Directory
    -y Player Template Location, relative to Template Directory
 #### Templates
-*(Global) Search Template*
+*Search Template*
 - `<!-- __CINERA_INCLUDES__ -->` _to put inside your own `<head></head>`_
 - `<!-- __CINERA_SEARCH__ -->` _the table of contents and search functionality_
 *Player Template*
 - `<!-- __CINERA_INCLUDES__ -->` _to put inside your own `<head></head>`_
 - `<!-- __CINERA_MENUS__ -->`
 - `<!-- __CINERA_PLAYER__ -->`
 - `<!-- __CINERA_SCRIPT__ -->` _must come after `<!-- __CINERA_MENUS__ -->` and `<!-- __CINERA_PLAYER__ -->`_
 *Optional tags available for use in your Player Template*
 - `<!-- __CINERA_TITLE__ -->`
 - `<!-- __CINERA_VIDEO_ID__ -->`
 - `<!-- __CINERA_VOD_PLATFORM__ -->`
-*Other tags available for use in any template*
+*Other tags available for use in either template*
 - Asset tags:
   - `<!-- __CINERA_ASSET__ path.ext -->`
       General purpose tag that outputs the URL of the specified asset
@ -67,50 +96,28 @@ and [Hardening your HTTP response headers](https://scotthelme.co.uk/hardening-yo
       General purpose tag that outputs the URL of the specified asset
       relative to the Images Directory (-i)
   - `<!-- __CINERA_CSS__ path.ext -->`
-       Convenience tag that outputs a `<link rel="stylesheet"...>` node
+       Convenience tag that outputs a <link rel="stylesheet"...> node
       for the specified asset relative to the CSS Directory (-c), for
-       use inside your `<head>` block
+       use inside your <head> block
   - `<!-- __CINERA_JS__ path.ext -->`
-       Convenience tag that outputs a `<script type="text/javascript"...>`
+       Convenience tag that outputs a <script type="text/javascript"...>
       node for the specified asset relative to the JS Directory (-j),
-       for use wherever a `<script>` node is valid
+       for use wherever a <script> node is valid
 The path.ext in these tags supports parent directories to locate the
 asset file relative to its specified type directory (generic, CSS, image
 or JS), including the "../" directory, and paths containing spaces must
 be surrounded with double-quotes (\-escapable if the quoted path itself
 contains double-quotes).
-All these asset tags additionally perform versioning, appending a query string
+All these asset tags additionally perform revving, appending a query
-(-Q) and the file's checksum to the URL. Changes to a file trigger a rehash and
+string (-Q) and the file's checksum to the URL. Changes to a file
-edit of all HTML pages citing this asset.
+trigger a rehash and edit of all HTML pages citing this asset.
 - Navigation / Menu tags:
    - `<!-- __CINERA_NAV__ -->`
        This menu will contain only the current project, its siblings and
        subprojects of both the aforementioned
    - `<!-- __CINERA_GLOBAL_NAV__ -->`
        This menu will contain every project in the configuration
 These navigation tags additionally take one parameter, e.g.
 `<!-- __CINERA_NAV__ horizontal -->`:
    - `dropdown`
        A dropdown menu, that opens on hover
    - `horizontal`
        More-or-less the same as `dropdown`, but always open
    - `plain`
        A straightforward `<ul>` for you to style how you like
 - `<!-- __CINERA_PROJECT__ -->`
    The project's `html_title` if configured, otherwise its `title`
 - `<!-- __CINERA_PROJECT_PLAIN__ -->`
    The project's `title`
 - `<!-- __CINERA_PROJECT_ID__ -->`
 - `<!-- __CINERA_PROJECT_LINEAGE__ -->`
    The IDs of all projects from the root to the current project, separated
    by a spaced-slash
 - `<!-- __CINERA_SEARCH_URL__ -->`
 - `<!-- __CINERA_THEME__ -->`
- `<!-- __CINERA_URL__ -->`
+- `<!-- __CINERA_URL__ -->` _Only really usable if BaseURL is set (-B)_
 - `<!-- __CINERA_CUSTOM0__ -->`
 - `<!-- __CINERA_CUSTOM1__ -->`
 - `<!-- __CINERA_CUSTOM2__ -->`
@ -128,15 +135,106 @@ invalid, _Cinera_ will tell you what's wrong.
 #### Arguments
-    Usage: ./cinera [option(s)]
+    Usage: ./cinera [option(s)] filename(s)
    Options:
-        -c <config file path>
+        Paths: (advisedly universal, but may be set per-(sub)project as required)
-            Set the main config file path
+            -r <assets root directory>
-            Defaults to: $XDG_CONFIG_HOME/cinera/cinera.conf
+                Override default assets root directory (".")
-        -0
+            -R <assets root URL>
-            Dry-run mode. Parse and print the config, but do not modify the
+                Override default assets root URL ("")
-            filesystem
+                IMPORTANT: -r and -R must correspond to the same location
                UNSUPPORTED: If you move files from RootDir, the RootURL should
                correspond to the resulting location
                -c <CSS directory path>
                    Override default CSS directory (""), relative to root
                -i <images directory path>
                    Override default images directory (""), relative to root
                -j <JS directory path>
                    Override default JS directory (""), relative to root
                -Q <revved resources query string>
                    Override default query string ("r")
                    To disable revved resources, set an empty string with -Q ""
        Project Settings:
            -p <project ID>
                Set the project ID, triggering PROJECT EDITION
            -m <default medium>
                Override default default medium ("programming")
                Known project defaults:
                    bitwise:        programming
                    book:           research
                    coad:           research
                    reader:         research
                    riscy:          programming
                    risc:           speech
                    chat:           speech
                    code:           programming
                    intro-to-c:     programming
                    misc:           admin
                    ray:            programming
                    hmdshow:        speech
                    lecture:        speech
                    stream:         programming
                    special:        programming
                    obbg:           programming
                    sysadmin:       admin
            -s <style>
                Set the style / theme, corresponding to a cinera__*.css file
                This is equal to the "project" field in the HMML files by default
        Project Input Paths
            -d <annotations directory>
                Override default annotations directory (".")
            -t <templates directory>
                Override default templates directory (".")
                -x <search template location>
                    Set search template file path, either absolute or relative to
                    template directory, and enable integration
                -y <player template location>
                    Set player template file path, either absolute or relative
                    to template directory, and enable integration
        Project Output Paths
            -b <base output directory>
                Override project's default base output directory (".")
            -B <base URL>
                Override default base URL ("")
                NOTE: This must be set, if -n or -a are to be used
                -n <search location>
                    Override default search location (""), relative to base
                -a <player location>
                    Override default player location (""), relative to base
                NOTE: The PlayerURLPrefix is currently hardcoded in cinera.c but
                      will be configurable in the full configuration system
        Single Edition Output Path
            -o <output location>
                Override default output player location ("out.html")
        -1
            Open search result links in the same browser tab
                NOTE: Ideal for a guide embedded in an iframe
        -f
            Force integration with an incomplete template
        -g
            Ignore video privacy status
                NOTE: For use with projects whose videos are known to all be public,
                to save us having to check their privacy status
        -q
            Quit after syncing with annotation files in project input directory
            UNSUPPORTED: This is likely to be removed in the future
        -w
            Force quote cache rebuild (memory aid: "wget")
        -l <n>
            Override default log level (0), where n is from 0 (terse) to 7 (verbose)
        -u <seconds>
            Override default update interval (4)
        -e
            Display (examine) database and exit
        -v
--- a/cinera/cinera.c
+++ b/cinera/cinera.c
--- a/cinera/cinera.css
+++ b/cinera/cinera.css
@ -506,16 +506,15 @@ ul.cineraNavPlain li.current > a {
 .cineraMenus > .cineraHelp,
 .cineraHelp {
    cursor: pointer;
    box-sizing: content-box;
    border: 1px solid;
    border-radius: 4px;
-    height: .5rem;
+    height: 6px;
    width: .5rem;
    padding: 4px;
    width: 6px;
    margin: 2px;
    font-size: .75rem;
    font-weight: bold;
-    line-height: .5rem;
+    line-height: 6px;
    text-align: center;
    z-index: 64;
 }
@ -540,16 +539,6 @@ ul.cineraNavPlain li.current > a {
    display: block;
 }
 .cineraHelp .help_container .help_custom_index {
    background-color: #159 !important;
 }
 .cineraHelp .help_container h2 .help_title_key {
    padding: .2em;
    border: 1px solid;
    border-radius: 4px;
 }
 .cineraHelp .help_container .help_key {
    box-sizing: content-box;
    font-family: Inconsolata;
@ -624,11 +613,12 @@ ul.cineraNavPlain li.current > a {
 .cineraMenus > .menu .credits_container {
    border: 1px solid;
    border-top: none;
-    z-index: -1; /* NOTE(matt): Using "display: none" to hide them proved problematic for scrolling non-visible menus */
+    display: none;
    overflow-y: auto;
    position: absolute;
    right: 0;
    top: 100%;
    z-index: 8;
 }
 .cineraMenus > .menu .refs,
@ -648,7 +638,7 @@ ul.cineraNavPlain li.current > a {
 }
 .cineraMenus > .menu .visible {
-    z-index: 8;
+    display: block;
 }
 .cineraMenus > .menu > .refs .ref {
@ -746,11 +736,6 @@ ul.cineraNavPlain li.current > a {
    margin-right: 4px;
 }
 .cineraMenus > .menu > .filter_container .filter_header {
    position: sticky;
    top: 0;
 }
 .cineraMenus > .menu > .filter_container .filter_mode,
 .cineraMenus > .menu > .link_container #cineraLinkMode {
    cursor: pointer;
@ -770,13 +755,11 @@ ul.cineraNavPlain li.current > a {
    text-align: center;
 }
 .cineraMenus > .menu > .filter_container .filter_header .filter_titles,
 .cineraMenus > .menu > .filter_container .filters {
    display: flex;
    flex-flow: row nowrap;
 }
 .cineraMenus > .menu > .filter_container .filter_header .filter_titles > *,
 .cineraMenus > .menu > .filter_container .filters > * {
    width: 50%;
    flex-grow: 1;
@ -985,7 +968,6 @@ ul.cineraNavPlain li.current > a {
 .cineraMenus > .menu > .filter_container .filter_content .category,
 .cineraPlayerContainer .markers_container > .markers .marker .cineraContent .cineraCategories .category {
    box-sizing: content-box;
    border-radius: 50%;
    height: 5px;
    width: 5px;
--- a/cinera/cinera_config.c
+++ b/cinera/cinera_config.c
--- a/cinera/cinera_player_post.js
+++ b/cinera/cinera_player_post.js
@ -1,5 +1,40 @@
 var cinera = document.querySelector(".cinera");
 var baseURL = location.hash ? (location.toString().substr(0, location.toString().length - location.hash.length)) : location;
 var originalTextContent = {
    TitleQuotes: null,
    TitleReferences: null,
    TitleCredits: null,
    EpisodePrev: null,
    EpisodeNext: null,
 };
 var menuState = [];
 var titleBar = cinera.querySelector(".cineraMenus");
 var quotesMenu = null;
 var referencesMenu = null;
 var filterMenu = null;
 var viewsMenu = null;
 var linkMenu = null;
 var creditsMenu = null;
 var sourceMenus = null;
 var helpButton = null;
 var helpDocumentation = null;
 // NOTE(matt):  One set of markers per page. There is code to support multiple, which we may want to extend everywhere
 var MarkersContainer = cinera.querySelector(".markers_container");
 var views = {
    REGULAR: 0,
    THEATRE: 1,
    SUPERTHEATRE: 2,
 };
 var devices = {
    DESKTOP: 0,
    MOBILE: 1,
 };
 var CineraProps = {
    C: null,
    V: views.REGULAR,
@ -22,19 +57,275 @@ var CineraProps = {
 };
 CineraProps.O = GetRealOrientation(orientations.LANDSCAPE_LEFT, CineraProps.IsMobile);
 if(titleBar)
 {
    quotesMenu = titleBar.querySelector(".quotes_container");
    if(quotesMenu)
    {
        originalTextContent.TitleQuotes = quotesMenu.previousElementSibling.textContent;
        menuState.push(quotesMenu);
        var quoteItems = quotesMenu.querySelectorAll(".ref");
        if(quoteItems)
        {
            for(var i = 0; i < quoteItems.length; ++i)
            {
                quoteItems[i].addEventListener("mouseenter", function(ev) {
                    mouseOverQuotes(this);
                })
            };
        }
        var quoteTimecodes = quotesMenu.querySelectorAll(".refs .ref .ref_indices .timecode");
        for (var i = 0; i < quoteTimecodes.length; ++i) {
            quoteTimecodes[i].addEventListener("click", function(ev) {
                if (player) {
                    var time = ev.currentTarget.getAttribute("data-timestamp");
                    mouseSkipToTimecode(player, time, ev);
                }
            });
        }
        var lastFocusedQuote = null;
    }
    referencesMenu = titleBar.querySelector(".references_container");
    if(referencesMenu)
    {
        originalTextContent.TitleReferences = referencesMenu.previousElementSibling.textContent;
        menuState.push(referencesMenu);
        var referenceItems = referencesMenu.querySelectorAll(".ref");
        if(referenceItems)
        {
            for(var i = 0; i < referenceItems.length; ++i)
            {
                referenceItems[i].addEventListener("mouseenter", function(ev) {
                    mouseOverReferences(this);
                })
            };
            var lastFocusedReference = null;
            var lastFocusedIdentifier = null;
        }
        var refTimecodes = referencesMenu.querySelectorAll(".refs .ref .ref_indices .timecode");
        for (var i = 0; i < refTimecodes.length; ++i) {
            refTimecodes[i].addEventListener("click", function(ev) {
                if (player) {
                    var time = ev.currentTarget.getAttribute("data-timestamp");
                    mouseSkipToTimecode(player, time, ev);
                }
            });
        }
    }
    if(referencesMenu || quotesMenu)
    {
        var refSources = titleBar.querySelectorAll(".refs .ref"); // This is for both quotes and refs
        for (var i = 0; i < refSources.length; ++i) {
            refSources[i].addEventListener("click", function(ev) {
                if (player) {
                    player.pause();
                }
            });
        }
    }
    filterMenu = titleBar.querySelector(".filter_container");
    if(filterMenu)
    {
        menuState.push(filterMenu);
        var lastFocusedCategory = null;
        var lastFocusedTopic = null;
        var lastFocusedMedium = null;
        var filter = filterMenu.parentNode;
        var filterModeElement = filter.querySelector(".filter_mode");
        filterModeElement.addEventListener("click", function(ev) {
            ev.stopPropagation();
            toggleFilterMode();
        });
        var filterMode = filterModeElement.classList[1];
        var filterItems = filter.querySelectorAll(".filter_content");
        var filterInitState = new Object();
        var filterState = new Object();
        for(var i = 0; i < filterItems.length; ++i)
        {
            filterItems[i].addEventListener("mouseenter", function(ev) {
                navigateFilter(this);
            })
            filterItems[i].addEventListener("click", function(ev) {
                ev.stopPropagation();
                filterItemToggle(this);
            });
            var filterItemName = filterItems[i].classList.item(1);
            if(filterItems[i].parentNode.classList.contains("filter_topics"))
            {
                filterInitState[filterItemName] = { "type" : "topic", "off": (filterItems[i].classList.item(2) == "off") };
                filterState[filterItemName] = { "type" : "topic", "off": (filterItems[i].classList.item(2) == "off") };
            }
            else
            {
                filterInitState[filterItemName] = { "type" : "medium", "off": (filterItems[i].classList.item(2) == "off") };
                filterState[filterItemName] = { "type" : "medium", "off": (filterItems[i].classList.item(2) == "off") };
            }
        }
    }
    viewsMenu = titleBar.querySelector(".views");
    if(viewsMenu && !CineraProps.IsMobile)
    {
        menuState.push(viewsMenu);
        var viewsContainer = viewsMenu.querySelector(".views_container");
        viewsMenu.addEventListener("mouseenter", function(ev) {
            handleMouseOverViewsMenu();
        });
        viewsMenu.addEventListener("mouseleave", function(ev) {
            viewsContainer.style.display = "none";
        });
        var viewItems = viewsMenu.querySelectorAll(".view");
        for(var i = 0; i < viewItems.length; ++i)
        {
            viewItems[i].addEventListener("click", function(ev) {
                switch(this.getAttribute("data-id"))
                {
                    case "regular":
                    case "theatre":
                        {
                            toggleTheatreMode();
                        } break;
                    case "super":
                        {
                            toggleSuperTheatreMode();
                        } break;
                }
            });
        }
    }
    linkMenu = titleBar.querySelector(".link_container");
    linkTimestamp = true;
    if(linkMenu)
    {
        menuState.push(linkMenu);
        var linkMode = linkMenu.querySelector("#cineraLinkMode");
        var link = linkMenu.querySelector("#cineraLink");
        linkMode.addEventListener("click", function(ev) {
            ev.stopPropagation();
            toggleLinkMode(linkMode, link);
        });
        link.addEventListener("click", function(ev) {
            CopyToClipboard(link);
            toggleMenuVisibility(linkMenu);
        });
    }
    creditsMenu = titleBar.querySelector(".credits_container");
    if(creditsMenu)
    {
        originalTextContent.TitleCredits = creditsMenu.previousElementSibling.textContent;
        menuState.push(creditsMenu);
        var lastFocusedCreditItem = null;
        var creditItems = creditsMenu.querySelectorAll(".person, .support");
        for(var i = 0; i < creditItems.length; ++i)
        {
            creditItems[i].addEventListener("mouseenter", function(ev) {
                if(this != lastFocusedCreditItem)
                {
                    lastFocusedCreditItem.classList.remove("focused");
                    unfocusSprite(lastFocusedCreditItem);
                    if(lastFocusedCreditItem.classList.contains("support"))
                    {
                        setSpriteLightness(lastFocusedCreditItem.firstChild);
                    }
                    lastFocusedCreditItem = this;
                    focusedElement = lastFocusedCreditItem;
                    focusedElement.classList.add("focused");
                    focusSprite(focusedElement);
                    if(focusedElement.classList.contains("support"))
                    {
                        setSpriteLightness(focusedElement.firstChild);
                    }
                }
            });
            if(creditItems[i].tagName == "A")
            {
                creditItems[i].addEventListener("click", function(ev) {
                    if(player)
                    {
                        player.pause();
                    }
                });
            }
        }
    }
    sourceMenus = titleBar.querySelectorAll(".menu");
    helpButton = titleBar.querySelector(".cineraHelp");
    helpDocumentation = helpButton.querySelector(".help_container");
    BindHelp(helpButton, helpDocumentation);
 }
 var focusedElement = null;
 var focusedIdentifier = null;
 var playerContainer = cinera.querySelector(".cineraPlayerContainer")
 var prevEpisode = playerContainer.querySelector(".episodeMarker.prev");
 if(prevEpisode) { originalTextContent.EpisodePrev = prevEpisode.firstChild.textContent; }
 var nextEpisode = playerContainer.querySelector(".episodeMarker.next");
 if(nextEpisode) { originalTextContent.EpisodeNext = nextEpisode.firstChild.textContent; }
 var testMarkers = playerContainer.querySelectorAll(".marker");
 // NOTE(matt):  All the originalTextContent values must be set by this point, because the player's construction may need them
 var MobileCineraContentRuleSelector = ".cinera.mobile .cineraPlayerContainer .markers_container > .markers .marker .cineraContent";
 var MobileCineraContentRule = GetOrSetRule(MobileCineraContentRuleSelector);
 var MenuContainerRuleSelector = ".cineraMenus > .menu .quotes_container, .cineraMenus > .menu .references_container, .cineraMenus > .menu .filter_container, .cineraMenus > .menu .views_container, .cineraMenus > .menu .link_container, .cineraMenus > .menu .credits_container";
 var MenuContainerRule = GetOrSetRule(MenuContainerRuleSelector);
-var cinera = document.querySelector(".cinera");
+if(CineraProps.IsMobile)
-var player = new Player(cinera, onRefChanged);
+{
    InitMobileStyle();
 }
 else
 {
    var MenuMaxHeight = cinera.offsetHeight - titleBar.offsetHeight - 4;
    MenuContainerRule.style.maxHeight = MenuMaxHeight + "px";
 }
 var player = new Player(playerContainer, onRefChanged);
 if(CineraProps.IsMobile)
 {
    ConnectMobileControls(player);
 }
 var cineraViewStorageItem = "cineraView";
 if(viewsMenu && localStorage.getItem(cineraViewStorageItem))
 {
    toggleTheatreMode();
 }
 InitScrollEventListener(cinera);
 function
 DelayedUpdateSize()
 {
    player.updateSize();
 }
 window.addEventListener("resize", function() {
    if(CineraProps.IsMobile)
    {
-        setTimeout(DelayedUpdateSize, 512, player);
+        setTimeout(DelayedUpdateSize, 512);
    }
    else
    {
@ -42,10 +333,10 @@ window.addEventListener("resize", function() {
    }
 });
-screen.orientation.onchange = function() {
+window.onorientationchange = function() {
    if(CineraProps.IsMobile)
    {
-        setTimeout(DelayedUpdateSize, 512, player);
+        setTimeout(DelayedUpdateSize, 512);
    }
    else
    {
@ -60,17 +351,43 @@ document.addEventListener("keydown", function(ev) {
        key = "capitalSpace";
    }
-    if(!ev.getModifierState("Control") && player.handleKey(key) == true && player.MenusFocused.Item)
+    if(!ev.getModifierState("Control") && handleKey(key) == true && focusedElement)
    {
        ev.preventDefault();
    }
 });
-document.addEventListener("fullscreenchange", function() {
+for(var i = 0; i < sourceMenus.length; ++i)
    if(!document.fullscreenElement && CineraProps.V == views.SUPERTHEATRE)
 {
-        CineraProps.V = views.THEATRE;
+    sourceMenus[i].addEventListener("mouseenter", function(ev) {
-        localStorage.setItem(player.cineraViewStorageItem, views.THEATRE);
+        handleMenuTogglerInteraction(this, ev.type);
-        player.updateSize();
+    })
    sourceMenus[i].addEventListener("mouseleave", function(ev) {
        handleMenuTogglerInteraction(this, ev.type);
    })
    sourceMenus[i].addEventListener("click", function(ev) {
        handleMenuTogglerInteraction(this, ev.type);
    })
 };
 var colouredItems = playerContainer.querySelectorAll(".author, .member, .project");
 for(i = 0; i < colouredItems.length; ++i)
 {
    setTextLightness(colouredItems[i]);
 }
 var topicDots = cinera.querySelectorAll(".category");
 for(var i = 0; i < topicDots.length; ++i)
 {
    setDotLightness(topicDots[i]);
 }
 var lastTimestampStorageItem = "cineraTimecode_" + window.location.pathname;
 var lastTimestamp;
 if(location.hash) {
    player.setTimeThenPlay(location.hash.startsWith('#') ? location.hash.substr(1) : location.hash);
 }
 else if(lastTimestamp = localStorage.getItem(lastTimestampStorageItem))
 {
    player.setTimeThenPlay(lastTimestamp);
 }
 });
--- a/cinera/cinera_player_pre.js
+++ b/cinera/cinera_player_pre.js
--- a/cinera/cinera_pre.js
+++ b/cinera/cinera_pre.js
@ -13,9 +13,6 @@ DeriveReliableWindowDimensions()
        Y: null,
    };
    var ScrollPosX = window.scrollX;
    var ScrollPosY = window.scrollY;
    var DisplaySettings = [];
    for(var i = 0; i < document.body.children.length; ++i)
    {
@ -43,9 +40,6 @@ DeriveReliableWindowDimensions()
        Child.style.display = DisplaySettings.shift();
    }
    ScrollTriggeredInternally = true;
    window.scroll(ScrollPosX, ScrollPosY);
    return Result;
 }
@ -82,7 +76,7 @@ function IsVisible(Element, WindowDim) {
 function
 GetRealOrientation(PreferredLandscape, IsMobile)
 {
-    var Result = screen.orientation.angle;
+    var Result = window.orientation;
    var WindowDim = GetWindowDim(IsMobile);
    if(WindowDim.Y > WindowDim.X)
    {
@ -191,12 +185,6 @@ function enableSprite(Element)
 }
 function disableSprite(Element)
 {
    if(Element.classList.contains("focused"))
    {
        focusSprite(Element);
    }
    else
 {
    if(Element.classList.contains("cineraSprite"))
    {
@ -208,7 +196,6 @@ function disableSprite(Element)
        disableSprite(Element.children[i]);
    }
 }
 }
 function unfocusSprite(Element)
 {
@ -323,7 +310,6 @@ function IsInRangeEx(Min, N, Max)
 }
 /* Auto-scrolling */
 var ScrollTriggeredInternally = false;
 var LastScrollYPos = 0;
 var ScrollTicking = false;
 var ScrollerFunction;
@ -390,11 +376,7 @@ function
 InitScrollEventListener(Element, IsMobile, StickyObscuringElement)
 {
    window.addEventListener('scroll', function() {
-        if(ScrollTriggeredInternally)
+        if(ScrollCondition == undefined || ScrollCondition == true)
        {
            ScrollTriggeredInternally = false;
        }
        else if(ScrollCondition == undefined || ScrollCondition == true)
        {
            LastScrollYPos = window.scrollY;
@ -521,29 +503,17 @@ IsOverflowed(Element)
    return Element.scrollHeight > Element.clientHeight || Element.scrollWidth > Element.clientWidth;
 }
 function
 SetHelpUnfocused(Button)
 {
    Button.firstElementChild.innerText = "¿";
    Button.firstElementChild.title = "Keypresses will not pass through to Cinera because focus is currently elsewhere.\n\nTo regain focus, please press Tab / Shift-Tab (multiple times) or click somewhere related to Cinera other than the video, e.g. this button";
 }
 function
 SetHelpFocused(Button)
 {
    Button.firstElementChild.innerText = "?";
    Button.firstElementChild.title = ""
 }
 function
 BindHelp(Button, DocumentationContainer)
 {
    window.addEventListener("blur", function(){
-        SetHelpUnfocused(Button);
+        Button.firstElementChild.innerText = "¿";
        Button.firstElementChild.title = "Keypresses will not pass through to Cinera because focus is currently elsewhere.\n\nTo regain focus, please press Tab / Shift-Tab (multiple times) or click somewhere related to Cinera other than the video, e.g. this button";
    });
    window.addEventListener("focus", function(){
-        SetHelpFocused(Button);
+        Button.firstElementChild.innerText = "?";
        Button.firstElementChild.title = ""
    });
    Button.addEventListener("click", function() {
@ -551,16 +521,45 @@ BindHelp(Button, DocumentationContainer)
    })
 }
 function RGBtoHSL(colour)
 {
 	var rgb = colour.slice(4, -1).split(", ");
    var red = rgb[0];
    var green = rgb[1];
    var blue = rgb[2];
    var min = Math.min(red, green, blue);
    var max = Math.max(red, green, blue);
    var chroma = max - min;
    var hue = 0;
    if(max == red)
    {
        hue = ((green - blue) / chroma) % 6;
    }
    else if(max == green)
    {
        hue = ((blue - red) / chroma) + 2;
    }
    else if(max == blue)
    {
        hue = ((red - green) / chroma) + 4;
    }
    var saturation = chroma / 255 * 100;
    hue = (hue * 60) < 0 ? 360 + (hue * 60) : (hue * 60);
    return [hue, saturation]
 }
 function getBackgroundColourRGB(element) {
    var Colour = getComputedStyle(element).getPropertyValue("background-color");
    var depth = 0;
-    while((Colour == "transparent" || Colour == "rgba(0, 0, 0, 0)") && element.parentElement && depth <= 4)
+    while((Colour == "transparent" || Colour == "rgba(0, 0, 0, 0)") && depth <= 4)
    {
-        element = element.parentElement;
+        element = element.parentNode;
        Colour = getComputedStyle(element).getPropertyValue("background-color");
        ++depth;
    }
-	var Staging = Colour.slice(Colour.indexOf("(") + 1, -1).split(", ");
+	var Staging = Colour.slice(4, -1).split(", ");
    var Result = {
        R: parseInt(Staging[0]),
        G: parseInt(Staging[1]),
@ -581,8 +580,6 @@ function setTextLightness(textElement)
 {
    var textHue = textElement.getAttribute("data-hue");
    var textSaturation = textElement.getAttribute("data-saturation");
    if(textHue && textSaturation)
    {
    if(getBackgroundBrightness(textElement.parentNode) < 127)
    {
        textElement.style.color = ("hsl(" + textHue + ", " + textSaturation + ", 76%)");
@ -592,23 +589,19 @@ function setTextLightness(textElement)
        textElement.style.color = ("hsl(" + textHue + ", " + textSaturation + ", 24%)");
    }
 }
 }
 function setDotLightness(topicDot)
 {
-    var dotHue = topicDot.getAttribute("data-hue");
+    var Hue = RGBtoHSL(getComputedStyle(topicDot).getPropertyValue("background-color"))[0];
-    var dotSaturation = topicDot.getAttribute("data-saturation");
+    var Saturation = RGBtoHSL(getComputedStyle(topicDot).getPropertyValue("background-color"))[1];
    if(dotHue && dotSaturation)
    {
    if(getBackgroundBrightness(topicDot.parentNode) < 127)
    {
-            topicDot.style.backgroundColor = ("hsl(" + dotHue + ", " + dotSaturation + ", 76%)");
+        topicDot.style.backgroundColor = ("hsl(" + Hue + ", " + Saturation + "%, 76%)");
-            topicDot.style.borderColor = ("hsl(" + dotHue + ", " + dotSaturation + ", 76%)");
+        topicDot.style.borderColor = ("hsl(" + Hue + ", " + Saturation + "%, 76%)");
    }
    else
    {
-            topicDot.style.backgroundColor = ("hsl(" + dotHue + ", " + dotSaturation + ", 47%)");
+        topicDot.style.backgroundColor = ("hsl(" + Hue + ", " + Saturation + "%, 47%)");
-            topicDot.style.borderColor = ("hsl(" + dotHue + ", " + dotSaturation + ", 47%)");
+        topicDot.style.borderColor = ("hsl(" + Hue + ", " + Saturation + "%, 47%)");
        }
    }
 }
--- a/cinera/cinera_search_pre.js
+++ b/cinera/cinera_search_pre.js
@ -213,11 +213,11 @@ function prepareToParseIndexFile(project)
                mode = "markers";
                episode.markers = [];
            } else if (mode == "markers") {
-                var match = line.match(/"(\d+.\d+)": "(.+)"/);
+                var match = line.match(/"(\d+)": "(.+)"/);
                if (match == null) {
                    console.log(name, line);
                } else {
-                    var totalTime = parseFloat(line.slice(1));
+                    var totalTime = parseInt(line.slice(1));
                    var marker = {
                        totalTime: totalTime,
                        prettyTime: markerTime(totalTime),
@ -292,7 +292,7 @@ function markerTime(totalTime) {
    var markTime = "(";
    var hours = Math.floor(totalTime / 60 / 60);
    var minutes = Math.floor(totalTime / 60) % 60;
-    var seconds = Math.floor(totalTime) % 60;
+    var seconds = totalTime % 60;
    if (hours > 0) {
        markTime += padTimeComponent(hours) + ":";
    }
@ -460,7 +460,7 @@ function runSearch(refresh) {
        Search.ResultsSummary.style.display = "none";
    }
-    var totalTime = Math.floor(totalSeconds/60/60) + "h " + Math.floor(totalSeconds/60)%60 + "m " + Math.floor(totalSeconds)%60 + "s ";
+    var totalTime = Math.floor(totalSeconds/60/60) + "h " + Math.floor(totalSeconds/60)%60 + "m " + totalSeconds%60 + "s ";
    Search.ResultsSummary.textContent = "Found: " + numEpisodes + " episodes, " + numMarkers + " markers, " + totalTime + "total.";
 }
@ -3817,8 +3817,6 @@ PseudoPushButton(Button)
 function
 ResizeFunction()
 {
    var OriginalScrollX = scrollX;
    var OriginalScrollY = scrollY;
    CineraProps.Orientation = GetRealOrientation(orientations.LANDSCAPE_LEFT, CineraProps.IsMobile);
    if(CineraProps.IsMobile)
    {
@ -3843,7 +3841,7 @@ ResizeFunction()
            PickListView();
            // TODO(matt):  Inform user that we've switched to the list view
        }
-        scroll(OriginalScrollX, OriginalScrollY);
+        ScrollToWithOffset(Nav.Nexus, 0);
    }
    UpdateButtons();
 }
@ -3866,7 +3864,7 @@ InitResizeEventListener()
 function
 InitOrientationChangeListener()
 {
-    screen.orientation.onchange = function()
+    window.onorientationchange = function()
    {
        if(CineraProps.IsMobile)
        {
--- a/cinera/cinera_sprite_donorbox.png
+++ b/cinera/cinera_sprite_donorbox.png
--- a/cinera/cinera_sprite_github.png
+++ b/cinera/cinera_sprite_github.png
--- a/cinera/cinera_sprite_kofi.png
+++ b/cinera/cinera_sprite_kofi.png
--- a/hmmlib2/hmmlib.h
+++ b/hmmlib2/hmmlib.h
@ -24,8 +24,6 @@ typedef struct {
    char* output;
    char* template;
    char* medium;
    char* number;
    char* cc_lang;
    HMML_Credit* credits;
    size_t credit_count;
@ -76,7 +74,7 @@ typedef struct {
 typedef struct {
    int line;
-    int h, m, s, ms;
+    int h, m, s;
    char* text;
    char* author;
@ -471,7 +469,7 @@ next_attr:
 static void _hmml_parse_timecode(struct _hmml_parser* p, HMML_Timestamp* ts)
 {
-    unsigned int h = 0, m = 0, s = 0, ms = 0;
+    unsigned int h = 0, m = 0, s = 0;
    int offset = 0;
    int count = sscanf(p->cursor, "[%u:%u%n", &m, &s, &offset);
@ -485,7 +483,7 @@ static void _hmml_parse_timecode(struct _hmml_parser* p, HMML_Timestamp* ts)
    if(c == ':') {
        unsigned int tmp;
        offset = 0;
-        if(sscanf(p->cursor, ":%u%n", &tmp, &offset) != 1 || offset == 0) {
+        if(sscanf(p->cursor, ":%u]%n", &tmp, &offset) != 1 || offset == 0) {
            _hmml_err(p, "Unable to parse 3-part timecode");
        }
@ -494,27 +492,6 @@ static void _hmml_parse_timecode(struct _hmml_parser* p, HMML_Timestamp* ts)
        s = tmp;
        p->cursor += offset;
        c = *p->cursor;
    }
    if(c == '.') {
        unsigned int tmp;
        offset = 0;
        int non_number_chars = 2;
        int digits_in_100 = 3;
        int max_chars_to_parse = non_number_chars + digits_in_100;
        if(sscanf(p->cursor, ".%u]%n", &tmp, &offset) != 1 || offset == 0 || offset > max_chars_to_parse) {
            _hmml_err(p, "Unable to parse %u.5-part timecode", h ? 3 : 2);
        }
        for(int i = offset - non_number_chars; i < digits_in_100; ++i) {
            tmp *= 10;
        }
        ms = tmp;
        p->cursor += offset;
    } else if(c != ']') {
        _hmml_err(p, "Unable to parse timecode");
@ -522,10 +499,6 @@ static void _hmml_parse_timecode(struct _hmml_parser* p, HMML_Timestamp* ts)
        ++p->cursor;
    }
    if(ms >= 1000) {
        _hmml_err(p, "Milliseconds cannot exceed 999");
    }
    if(s >= 60) {
        _hmml_err(p, "Seconds cannot exceed 59");
    }
@ -537,7 +510,6 @@ static void _hmml_parse_timecode(struct _hmml_parser* p, HMML_Timestamp* ts)
    ts->h = h;
    ts->m = m;
    ts->s = s;
    ts->ms = ms;
 }
 static void _hmml_store_marker(struct _hmml_parser* p, HMML_Timestamp* ts, char** out, char* text_mem, size_t text_mem_size)
@ -762,9 +734,7 @@ static void _hmml_parse_video(struct _hmml_parser* p)
        { HSTR("id")             , &p->out.metadata.id },
        { HSTR("template")       , &p->out.metadata.template },
        { HSTR("medium")         , &p->out.metadata.medium },
        { HSTR("number")         , &p->out.metadata.number },
        { HSTR("output")         , &p->out.metadata.output },
        { HSTR("cc_lang")        , &p->out.metadata.cc_lang },
    };
    for(;;) {
@ -850,7 +820,7 @@ void hmml_free(HMML_Output* out)
 }
 const struct HMML_Version hmml_version = {
-    2, 0, 15
+    2, 0, 12
 };
 #undef HSTX